CHM13 PRO-seq Bowtie2 default alignments and Meryl unique k-mer filtering (not stranded)
The PRO-seq experiment was done on CHM13 cells and sequenced for 75bp single-ended reads.
Reads were trimmed and filtered before mapped with Bowtie2 default
Mapped reads were then filtered through unique genome-wide kmers
Savannah Hoyt (PROseq library prep & sequencing; all mapping & filtering)
Rachel O'Neill
Arang Rhie (Meryl software)