track cutnrun
compositeTrack off
shortLabel HG002_CutnRun-losalt-F3852_DEC20andFEB21
longLabel HG002 CutnRun low salt bwa-F3852 mapped (with no MAPQ filtering) and unique genome-wide kmer filtering from DEC 2020 and FEB 2021 runs
visibility hide
priority 30
type bigWig
group rna
html cutnrun.html
    
    track CENPA_CutnRun-losalt_bwa-F3852_DEC20
    parent cutnrun
    bigDataUrl cutnrun/dec/CENPA/HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_HG002X_HG38YF1548F3852.sort.bigwig
    shortLabel HG002 CENPA CutnRun losalt bwa-F3852 DEC20
    longLabel HG002 CENPA CutnRun bwa-F3852 no kmer filtering DEC 2020
    type bigWig
    visibility dense

    track CENPA_CutnRun-losalt_bwa-F3852_51mer-filt_DEC20
    parent cutnrun
    bigDataUrl cutnrun/dec/CENPA/HG002_CA_cutnrun-losalt_chm13_HG002X_HG38YF1548F3852.over.IlluminaPCRfree-chm13-v1-autosome_hg002-chrX_51mers_mrg-meryl_sort.bigwig
    shortLabel HG002 CENPA CutnRun losalt bwa-F3852 51mer-filt DEC20
    longLabel HG002 CENPA CutnRun bwa-F3852 unique 51mer filtering DEC 2020
    type bigWig
    visibility dense

    track IgG_CutnRun-losalt_bwa-F3852_DEC20
    parent cutnrun
    bigDataUrl cutnrun/dec/IgG/HG002_IgG_cutnrun_losalt_trimmed_q20_2.chm13_HG002X_HG38YF1548F3852.sort.bigwig
    shortLabel HG002 IgG CutnRun losalt bwa-F3852 DEC20
    longLabel HG002 IgG CutnRun bwa-F3852 no kmer filtering DEC 2020
    type bigWig    
    visibility dense

    track IgG_CutnRun-losalt_bwa-F3852_51mer-filt_DEC20
    parent cutnrun
    bigDataUrl cutnrun/dec/IgG/HG002_IgG_cutnrun-losalt_chm13_HG002X_HG38YF1548F3852.over.IlluminaPCRfree-chm13-v1-autosome_hg002-chrX_51mers_mrg-meryl_sort.bigwig
    shortLabel HG002 IgG CutnRun losalt bwa-F3852 51mer-filt DEC20
    longLabel HG002 IgG CutnRun bwa-F3852 unique 51mer filtering DEC 2020
    type bigWig
    visibility dense

    track CENPB_CutnRun-losalt_bwa-F3852_FEB21
    parent cutnrun
    bigDataUrl cutnrun/feb/CENPB/HG2_CB_ADGCCR09-F_S101_L002_2.chm13_HG002X_HG38YF3852_sort.bigwig
    shortLabel HG002 CENPB CutnRun losalt bwa-F3852 FEB21
    longLabel HG002 CENPB CutnRun bwa-F3852 no kmer filtering FEB 2021
    type bigWig
    visibility dense

    track CENPB_CutnRun-losalt_bwa-F3852_51mer-filt_FEB21
    parent cutnrun
    bigDataUrl cutnrun/feb/CENPB/HG002_CB_cutnrun-202021_losalt.F3852.over.IlluminaPCRfree-chm13-v1-autosome_hg002-chrX_51mers_mrg-meryl_sort.bigwig
    shortLabel HG002 CENPB CutnRun losalt bwa-F3852 51mer-filt FEB21
    longLabel HG002 CENPB CutnRun bwa-F3852 unique 51mer filtering FEB 2021
    type bigWig
    visibility dense

    track H3K9me3_CutnRun-losalt_bwa-F3852_FEB21
    parent cutnrun
    bigDataUrl cutnrun/feb/H3K9me3/HG2_K9Me3_ADGCCR09-H_S103_L002_2.chm13_HG002X_HG38YF3852_sort.bigwig
    shortLabel HG002 H3K9me3 CutnRun losalt bwa-F3852 FEB21
    longLabel HG002 H3K9me3 CutnRun bwa-F3852 no kmer filtering FEB 2021
    type bigWig
    visibility dense

    track H3K9me3_CutnRun-losalt_bwa-F3852_51mer-filt_FEB21
    parent cutnrun
    bigDataUrl cutnrun/feb/H3K9me3/HG002_H3K9me3_cutnrun-202021_losalt.F3852.over.IlluminaPCRfree-chm13-v1-autosome_hg002-chrX_51mers_mrg-meryl_sort.bigwig
    shortLabel HG002 H3K9me3 CutnRun losalt bwa-F3852 51mer-filt FEB21
    longLabel HG002 H3K9me3 CutnRun bwa-F3852 unique 51mer filtering FEB 2021
    type bigWig
    visibility dense
    
    track IgG_CutnRun-losalt_bwa-F3852_FEB21
    parent cutnrun
    bigDataUrl cutnrun/feb/IgG/HG2_IgG_ADGCCR09-G_S102_L002_2.chm13_HG002X_HG38YF3852_sort.bigwig
    shortLabel HG002 IgG CutnRun losalt bwa-F3852 FEB21
    longLabel HG002 IgG CutnRun bwa-F3852 no kmer filtering FEB 2021
    type bigWig
    visibility dense

    track IgG_CutnRun-losalt_bwa-F3852_51mer-filt_FEB21
    parent cutnrun
    bigDataUrl cutnrun/feb/IgG/HG002_IgG_cutnrun-202021_losalt.F3852.over.IlluminaPCRfree-chm13-v1-autosome_hg002-chrX_51mers_mrg-meryl_sort.bigwig
    shortLabel HG002 IgG CutnRun losalt bwa-F3852 51mer-filt FEB21
    longLabel HG002 IgG CutnRun bwa-F3852 unique 51mer filtering FEB 2021
    type bigWig
    visibility dense