Description

A track showing gene models as from liftoff based on GENCODE produced by UW.

Methods

Display Conventions and Configuration

Liftoff was run with the following command using the comprehensive GenCode Release 35 (GRCh38.p13) gff. liftoff -dir {output.temp} -sc 0.85 -copies -p {threads} -g {input.gff} -o {output.gff} -u {output.unmapped} {input.t} {input.r} Custom scripts were used to make a bed file from the resulting gff.

Data access

Release history

  1. 09/08/2020

Contact

Contact Mitchell R. Vollger <mvollger@uw.edu>

Credits

Liftoff: an accurate gene annotation mapping tool, doi: https://doi.org/10.1101/2020.06.24.169680