Description

Winnowmap - Nanopore (guppy 3.6.0) variant calls

Methods

Input reads: ONT UL reads (sampled by minimum length=100 Kbp, guppy_3.6.0_rel5) SV caller: Sniffles 1.0.11 (-s 5) This track includes SV calls except low confidence SVs (with 0/0 genotype, filter suggested by Michael Alonge)

Display Conventions and Configuration

Data access

Data is available on globus: team-nanopore/alignments_and_SVs/20200605/output.filtered.vcf

Release history

1. 2020 June 9 : Initial upload for 20200602 release

Contact

Contact Chirag Jain<chirag.jain@nih.gov>

Credits