Description

Centromere naive HOR annotation (based on available canonical HORs only).

Methods

Script merges consecutive monomers into one HOR if they go in the same order in any canonical HOR.

Display Conventions and Configuration

  1. Each HOR variant is painted in its own color.
  2. Canonical HOR is refered by its name: S3CXH1L, S2C8H1L, etc.
  3. HOR variants are represented by the name of canonical HOR and the list of alpha-satellites it contains:
    1. HOR variant S2C8H1L_5-11 consists of alpha-satellites 5 to 11 from canonical HOR S2C8H1L.
    2. HOR variant S3CXH1L_1-11_7-12 consits of alpha-satelliets 1 to 11 and 7 to 12 from canonical HOR S3CXH1L.

Data access

Release history

  1. August 19: Initial upload for 20200727 release.

Contacts

Credits